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Tuesday, February 9, 2010

Plant Tissue Culture

Plant Tissue Culture

Presenter: Lydiane (Ann) Kyte
Host: Kathy Liu
Discussion

Did you ever have a plant that was so unique or so beautiful that you wished you had hundreds or thousands of them to enjoy or to sell? Plant tissue culture (micropropagation) is a technique which will do just that for us. We are going to discuss this tool which is used so extensively in the nursery business and in plant biotechnology. It is a fascinating and useful tool which allows the rapid production of many genetically identical plants using relatively small amounts of space, supplies and time.

Basically the technique consists of taking a piece of a plant (such as a stem tip, node, meristem, embryo, or even a seed) and placing it in a sterile, (usually gel-based) nutrient medium where it multiplies. The formulation of the growth medium is changed depending upon whether you are trying to get the plant to produce undifferentiated callus tissue, multiply the number of plantlets, grow roots, or multiply embryos for "artificial seed".

For many who become superficially aware of the technique it seems shrouded in mystery and is shrugged off as too technical to be of concern. Actually, it is no more of a mystery than taking a cutting of your favorite house plant and growing it to share with a friend. As for being technical, you can begin plant tissue culture with as little as a cookbook approach and a feeling for sterile technique.

Some people have visions of scientists doing plant tissue cultures in white gowns and masks in hospital-clean environments. Such conditions are excessive. While it is true that mold spores, bacteria, and other contaminants will grow and overrun a culture, air that is not moving has a minimum of contaminants. In addition, disinfection of implements, work surface and nearby areas helps eliminate contaminants.

The guidelines for preparation and the laboratory protocol provided here are given as a place to begin. Included with is a limited discussion of some of the many options you have as you explore micropropagation. We can discuss these in more depth if you have questions, concerns or related experiences to share. I would be particularly interested in success and challenges you may have had or are currently having in your classroom.

Some suggestions are given for the following
(a) Selecting plant sources. Some species, or even clones are easier to grow in culture than others. Some respond reluctantly to culture, some do not respond at all, and many plants have never been tried.

(b) Choosing a growth medium (price, convenience, type of plant and purpose of the micropropagation all enter into this decision.) How important are the kinds of hormones used? On limited scale, media ingredients are available at the grocery and health food stores.

(c) Suggestions for media preparation and sterilization. There are alternatives to sterilization in a pressure cooker or an autoclave.

(d) Methods for cleaning, storing and manipulating explants (plant pieces to be cultured).

Given certain basics there are many options for procedure, equipment and supplies for plant tissue culture. Some of your decisions will be based upon the amount of time, money and space you have. Other decisions will be based upon why you are doing plant tissue culture and what you expect as a result (more plants?) . Catalogs, such as Sigma, Carolina Biological, or Edmund Scientific are good reference and they are for purchasing needed materials..

I look forward to sharing tissue culture experiences with you.


References:
Debergh, P.C. and R.H. Zimmerman, eds. 1991. Micropropagation, Technology and Application. Kluwer Academic Publishers. $61.50. Lab design, info on labs worldwide, in depth discussions of problems. Not for the beginner.

Donnelly, D.J., and W.E.Vidaver, 1988. Glossary of Plant Tissue Culture, Portland, OR. Timber Press, $22.95. Good definitions of tissue culture terms.

Kyte, Lydiane and J. Kleyn, 1996. Plants from Test Tubes: An Introduction to Micropropagation, 3rd ed., Timber Press, 1996 $29.95. Good basics for the beginning amateur or grower.

Smith, Roberta H., 1992. Plant Tissue Culture-Techniques and Experiments. Academic Press. $35.00. Good introduction and broad base for college course.

Trigiano, Robert N, and Dennis J. Gray, eds.1996,Plant Tissue Culture Concepts and Laboratory Exercises. CRC Press. $65.00. For the advanced student.


Sources of supplies:

Carolina Biological

Edmond Scientific

PhytoTechnology Laboratories
This company specializes in plant tissue culture supplies. Downloadable documents (choose MS Word or PDF format) on Media Preparation, Setting Up a Tissue Culture Lab, Basic Laboratory Procedures, and more are available in the "Technical" section of the web site.

Sigma, 1996. "Plant Tissue Culture Catalog".
In addition to media ingredients, premixes, equipment and supplies, this catalog contains a media comparison chart, procedures for media preparations.references and other valuable data.


REPEREN :http://www.accessexcellence.org/LC/ST/st2bgplant.php Readmore »»

Plant Tissue Culture Media

Plant Tissue Culture Media

Plant Tissue Culture refers to the technique of growing plant cells, tissues, organs, seeds or other plant parts in a sterile environment on a nutrient medium. Culture media used for in vitro cultivation of plant cells are composed of following basic components:
Complex Mixture of Salts
These include essential elements or mineral ions important for plant nutrition and their physiological function. The essential elements can further be divided into the following categories:

Macroelements (or macronutrients)
Microelements (or micronutrients)
Iron source
 
Macroelements :- These elements are required in large amounts for plant growth and development. Nitrogen, phosphorus, potassium, magnesium, calcium and sulphur (and carbon, which is added separately) are regarded as macroelements. These elements comprise at least 0.1% of the dry weight of plants.
     
Microelements :- These elements are required in trace amounts for plant growth and development. Manganese, iodine, copper, cobalt, boron, molybdenum, iron and zinc are regarded as microelements, although other elements like aluminium and nickel are frequently found in some formulations.
Plant Tissue Culture Media
     
Iron Source :- Iron is usually added in the medium as iron sulphate, although iron citrate can also be used. Ethylenediaminetetraacetic acid (EDTA) is usually used in conjunction with the iron sulphate. The EDTA complexes with the iron so as to allow the slow and continuous release of iron into the medium. Uncomplexed iron can precipitate out of the medium as ferric oxide.


Organic Supplements
These include vitamins and amino acids. Two vitamins, i.e., thiamine (vitamin B1) and myoinositol (a vitamin B) are essential for the culture of plant cells in vitro. However, other vitamins are often added to for historical reasons. The most commonly used amino acid is glycine. However, arginine, asparagine, aspartic acid, alanine, glutamic acid, glutamine and proline are also used. Amino acids provide a source of reduced nitrogen and, like ammonium ions, uptake causes acidification of the medium. Casein hydrolysate can be used as a source of a mixture of amino acids.


Carbon Source
The most commonly used carbon source is sucrose. It is readily assimilated and relatively stable. Other carbohydrates like glucose, maltose, galactose and sorbitol can also be used and may prove better than sucrose in specialized circumstances.

Gelling Agents
Plant tissue culture media can be used in either liquid or ‘solid’ forms, depending on the type of culture being grown. Agar, produced from seaweed, is the most common type of gelling agent, and is ideal for routine applications. For more demanding applications, a range of purer gelling agents are available. Purified agar or agarose can be used, as can a variety of gellan gums.


Plant Growth Regulators
Specific media manipulations can be used to direct the development of plant cells in culture due to plasticity and totipotency. Plant growth regulators are the critical media components in determining the developmental pathway of the plant cells. There are five main classes of plant growth regulator used in plant cell culture, namely:
Auxins
Cytokinins
Gibberellins
Abscisic Acid
Ethylene
     
Auxins
:-
Auxins promote both cell division and cell growth. IAA (indole-3-acetic acid) is the most important naturally occurring auxin but its use in plant tissue culture media is limited because it is unstable to both heat and light. 2,4-Dichlorophenoxyacetic acid (2,4-D) is the most commonly used auxin and is extremely effective in most circumstances.

 
Cytokinins
:-
Cytokinins promote cell division. Of the naturally occurring cytokinins, only zeatin and 2iP (2-isopentyl adenine have some use in plant tissue culture media. The synthetic analogues, kinetin and BAP (benzylaminopurine), are used more frequently. Non-purine-based chemicals, such as substituted phenylureas, are also used as cytokinins in plant tissue culture media.

 
Auxins
:-
Auxins promote both cell division and cell growth. IAA (indole-3-acetic acid) is the most important naturally occurring auxin but its use in plant tissue culture media is limited because it is unstable to both heat and light. 2,4-Dichlorophenoxyacetic acid (2,4-D) is the most commonly used auxin and is extremely effective in most circumstances.
Plant Tissue Culture Media
     
Cytokinins
:-
Cytokinins promote cell division. Of the naturally occurring cytokinins, only zeatin and 2iP (2-isopentyl adenine have some use in plant tissue culture media. The synthetic analogues, kinetin and BAP (benzylaminopurine), are used more frequently. Non-purine-based chemicals, such as substituted phenylureas, are also used as cytokinins in plant tissue culture media.



Gibberellins
:-
Gibberellins are involved in regulating cell elongation, in determining plant height and fruit-set. Only a few of the gibberellins like GA3 are used in plant tissue culture media.
Abscisic Acid
:-
It is used in plant tissue culture to promote distinct developmental pathways such as somatic embryogenesis. Abscisic acid (ABA) inhibits cell division.



Ethylene
:-
Ethylene is associated with controlling fruit ripening in climacteric fruits, and its use in plant tissue culture is not widespread. Some plant cell cultures produce ethylene, which, if it builds up sufficiently, can inhibit the growth and development of the culture.
 

Antibiotics
Antibiotics are substances produced by certain microorganisms that suppress the growth of other microorganisms and eventually destroy them. Their applications include:
A.
Suppresses bacterial infections in plant cell and tissue culture.
B.
Suppresses mould and yeast infections in cell cultures.
C.
Eliminates Agrobacterium species after the transformation of plant tissue.
These antibiotics can be divided into different classes on the basis of chemical structure and their mechanism of action:

Inhibitors of Bacterial Cell Wall Synthesis
 
e.g. β-lactam antibiotics, Penicillins and Cephalosporins.

Antibiotics that affect Cell Membrane permeability.
 
  •  Antibacterial e.g. Colistin Sulphate, Polymixin B Sulphate, Gramicidin
  •  Antifungal e.g. Amphotericin B, Nystatin, Pimaricin

Bacteriostatic Inhibitors of Protein
Plant Tissue Culture Media
 
Antibiotics that affect the function of 30 S or 50 S ribosomal subunits to cause a reversible inhibition of protein synthesis. e.g. Chloramphenicol, Chlortetracycline HCl, Clindamycin HCl, Doxycycline HCl, Erythromycin, Lincomycin HCl, Oxytetracycline HCl, Spectinomycin sulphate, Tetracycline HCl, Tylosin tartrate, Lincomycin HCl
Bactericide Inhibitors of Protein Synthesis
 
Antibiotics that bind to the 30 S ribosomal subunit and alter protein synthesis which eventually leads to cell death. This group includes:
 
  • Aminoglycosides: Apramycin, Butirosine, Gentamicin, Kanamycin, Neomycin, Streptomycin,
       Tobramycin.
  • Inhibitors of Nucleic Acid Metabolism: e.g. Rifampicin, Mitomycin C and Nalidixic acid
  • Antimetabolites: Antibiotics, which block specific metabolic steps that are essential to microorganisms
       e.g.  Metronidazole, Miconazole, Nitrofurantoin, Trimethoprim and Sulphomethoxazole.
  • Nucleic Acid Analogs, which inhibit enzymes essential for DNA synthesis. e.g. 5-Fluorouracil,    Mercaptopurine.

Preparation of Plant Tissue Culture Medium
Measure approximately 90% of the required volume of the deionized-distilled water in a flask/container of double the size of the required volume.

Add the dehydrated medium into the water and stir to dissolve the medium completely. Gentle heating of the solution may be required to bring powder into solution.

Add desired heat stable supplements to the medium solution.

Add additional deionized-distilled water to the medium solution to obtain the final required volume.

Set the desired pH with NaOH or HCl.

Dispense the medium into culture vessels.

Sterilize the medium by autoclaving at 15 psi (121οC) for appropriate time period. Higher temperature
 
may result in poor cell growth.

Add heat labile supplements after autoclaving.
  referens by: http://www.planttissueculturemedia.com/ Readmore »»

Cell culture

Cell culture

Cell culture is the process by which cells are grown under controlled conditions. In practice the term "cell culture" has come to refer to the culturing of cells derived from multicellular eukaryotes, especially animal cells. The historical development and methods of cell culture are closely interrelated to those of tissue culture and organ culture.
Animal cell culture became a common laboratory technique in the mid-1900s,[1] but the concept of maintaining live cell lines separated from their original tissue source was discovered in the 19th century.[2]

History

The 19th-century English physiologist Sydney Ringer developed salt solutions containing the chlorides of sodium, potassium, calcium and magnesium suitable for maintaining the beating of an isolated animal heart outside of the body.[1] In 1885 Wilhelm Roux removed a portion of the medullary plate of an embryonic chicken and maintained it in a warm saline solution for several days, establishing the principle of tissue culture.[3] Ross Granville Harrison, working at Johns Hopkins Medical School and then at Yale University, published results of his experiments from 1907–1910, establishing the methodology of tissue culture.[4]
Cell culture techniques were advanced significantly in the 1940s and 1950s to support research in virology. Growing viruses in cell cultures allowed preparation of purified viruses for the manufacture of vaccines. The Salk polio vaccine was one of the first products mass-produced using cell culture techniques. This vaccine was made possible by the cell culture research of John Franklin Enders, Thomas Huckle Weller, and Frederick Chapman Robbins, who were awarded a Nobel Prize for their discovery of a method of growing the virus in monkey kidney cell cultures.

[edit] Concepts in mammalian cell culture

[edit] Isolation of cells

Cells can be isolated from tissues for ex vivo culture in several ways. Cells can be easily purified from blood, however only the white cells are capable of growth in culture. Mononuclear cells can be released from soft tissues by enzymatic digestion with enzymes such as collagenase, trypsin, or pronase, which break down the extracellular matrix. Alternatively, pieces of tissue can be placed in growth media, and the cells that grow out are available for culture. This method is known as explant culture.
Cells that are cultured directly from a subject are known as primary cells. With the exception of some derived from tumors, most primary cell cultures have limited lifespan. After a certain number of population doublings cells undergo the process of senescence and stop dividing, while generally retaining viability.
An established or immortalised cell line has acquired the ability to proliferate indefinitely either through random mutation or deliberate modification, such as artificial expression of the telomerase gene. There are numerous well established cell lines representative of particular cell types.

[edit] Maintaining cells in culture

Cells are grown and maintained at an appropriate temperature and gas mixture (typically, 37°C, 5% CO2 for mammalian cells) in a cell incubator. Culture conditions vary widely for each cell type, and variation of conditions for a particular cell type can result in different phenotypes being expressed.
Aside from temperature and gas mixture, the most commonly varied factor in culture systems is the growth medium. Recipes for growth media can vary in pH, glucose concentration, growth factors, and the presence of other nutrients. The growth factors used to supplement media are often derived from animal blood, such as calf serum. One complication of these blood-derived ingredients is the potential for contamination of the culture with viruses or prions, particularly in biotechnology medical applications. Current practice is to minimize or eliminate the use of these ingredients wherever possible, but this cannot always be accomplished. Alternative strategies involve sourcing the animal blood from countries with minimum BSE/TSE risk such as Australia and New Zealand, and using purified nutrient concentrates derived from serum in place of whole animal serum for cell culture.[5]
Cells can be grown in suspension or adherent cultures. Some cells naturally live in suspension, without being attached to a surface, such as cells that exist in the bloodstream. There are also cell lines that have been modified to be able to survive in suspension cultures so that they can be grown to a higher density than adherent conditions would allow. Adherent cells require a surface, such as tissue culture plastic or microcarrier, which may be coated with extracellular matrix components to increase adhesion properties and provide other signals needed for growth and differentiation. Most cells derived from solid tissues are adherent. Another type of adherent culture is organotypic culture which involves growing cells in a three-dimensional environment as opposed to two-dimensional culture dishes. This 3D culture system is biochemically and physiologically more similar to in vivo tissue, but is technically challenging to maintain because of many factors (e.g. diffusion).

[edit] Cell line cross-contamination

Cell line cross-contamination can be a problem for scientists working with cultured cells. Studies suggest that anywhere from 15–20% of the time, cells used in experiments have been misidentified or contaminated with another cell line.[6][7][8] Problems with cell line cross contamination have even been detected in lines from the NCI-60 panel, which are used routinely for drug-screening studies.[9][10] Major cell line repositories including the American Type Culture Collection (ATCC) and the German Collection of Microorganisms and Cell Cultures (DSMZ) have received cell line submissions from researchers that were misidentified by the researcher.[9][11] Such contamination poses a problem for the quality of research produced using cell culture lines, and the major repositories are now authenticating all cell line submissions.[12] ATCC uses short tandem repeat (STR) DNA fingerprinting to authenticate its cell lines.[13]
To address this problem of cell line cross-contamination, researchers are encouraged to authenticate their cell lines at an early passage to establish the identity of the cell line. Authentication should be repeated before freezing cell line stocks, every two months during active culturing and before any publication of research data generated using the cell lines. There are many methods for identifying cell lines including isoenzyme analysis, human lymphocyte antigen (HLA) typing and STR analysis.[13]
One significant cell-line cross contaminant is the immortal HeLa cell line.

[edit] Manipulation of cultured cells

As cells generally continue to divide in culture, they generally grow to fill the available area or volume. This can generate several issues:
Among the common manipulations carried out on culture cells are media changes, passaging cells, and transfecting cells. These are generally performed using tissue culture methods that rely on sterile technique. Sterile technique aims to avoid contamination with bacteria, yeast, or other cell lines. Manipulations are typically carried out in a biosafety hood or laminar flow cabinet to exclude contaminating micro-organisms. Antibiotics (e.g. penicillin and streptomycin) and antifungals (e.g. Amphotericin B) can also be added to the growth media.
As cells undergo metabolic processes, acid is produced and the pH decreases. Often, a pH indicator is added to the medium in order to measure nutrient depletion.

[edit] Media changes

In the case of adherent cultures, the media can be removed directly by aspiration and replaced.

[edit] Passaging cells

Passaging (also known as subculture or splitting cells) involves transferring a small number of cells into a new vessel. Cells can be cultured for a longer time if they are split regularly, as it avoids the senescence associated with prolonged high cell density. Suspension cultures are easily passaged with a small amount of culture containing a few cells diluted in a larger volume of fresh media. For adherent cultures, cells first need to be detached; this is commonly done with a mixture of trypsin-EDTA, however other enzyme mixes are now available for this purpose. A small number of detached cells can then be used to seed a new culture.

[edit] Transfection and transduction

Another common method for manipulating cells involves the introduction of foreign DNA by transfection. This is often performed to cause cells to express a protein of interest. More recently, the transfection of RNAi constructs have been realized as a convenient mechanism for suppressing the expression of a particular gene/protein.
DNA can also be inserted into cells using viruses, in methods referred to as transduction, infection or transformation. Viruses, as parasitic agents, are well suited to introducing DNA into cells, as this is a part of their normal course of reproduction.

[edit] Established human cell lines

One of the earliest human cell lines, descended from Henrietta Lacks, who died of the cancer that those cells originated from, the cultured HeLa cells shown here have been stained with Hoechst turning their nuclei blue.
Cell lines that originate with humans have been somewhat controversial in bioethics, as they may outlive their parent organism and later be used in the discovery of lucrative medical treatments. In the pioneering decision in this area, the Supreme Court of California held in Moore v. Regents of the University of California that human patients have no property rights in cell lines derived from organs removed with their consent.[14]

[edit] Generation of hybridomas

It is possible to fuse normal cells with an immortalised cell line. This method is used to produce monoclonal antibodies. In brief, lymphocytes isolated from the spleen (or possibly blood) of an immunised animal are combined with an immortal myeloma cell line (B cell lineage) to produce a hybridoma which has the antibody specificity of the primary lymphoctye and the immortality of the myeloma. Selective growth medium (HA or HAT) is used to select against unfused myeloma cells; primary lymphoctyes die quickly in culture and only the fused cells survive. These are screened for production of the required antibody, generally in pools to start with and then after single cloning.

[edit] Applications of cell culture

Mass culture of animal cell lines is fundamental to the manufacture of viral vaccines and many products of biotechnology. Biological products produced by recombinant DNA (rDNA) technology in animal cell cultures include enzymes, synthetic hormones, immunobiologicals (monoclonal antibodies, interleukins, lymphokines), and anticancer agents. Although many simpler proteins can be produced using rDNA in bacterial cultures, more complex proteins that are glycosylated (carbohydrate-modified) currently must be made in animal cells. An important example of such a complex protein is the hormone erythropoietin. The cost of growing mammalian cell cultures is high, so research is underway to produce such complex proteins in insect cells or in higher plants, use of single embryonic cell and somatic embryos as a source for direct gene transfer via practicle bombardment, transit gene expression and confocal microscopy observation is one of its applications. It also offers to confirm single cell origin of somatic embryos and the asymmetry of the first cell division, which starts the process.

[edit] Tissue culture and engineering

Cell culture is a fundamental component of tissue culture and tissue engineering, as it establishes the basics of growing and maintaining cells ex vivo. The major application of human cell culture is in stem cell industry where mesenchymal stem cells can be cultured and cryopreserved for future use.

[edit] Vaccines

Vaccines for polio, measles, mumps, rubella, and chickenpox are currently made in cell cultures. Due to the H5N1 pandemic threat, research into using cell culture for influenza vaccines is being funded by the United States government. Novel ideas in the field include recombinant DNA-based vaccines, such as one made using human adenovirus (a common cold virus) as a vector,[15][16] or the use of adjuvants.[17]

[edit] Culture of non-mammalian cells

[edit] Plant cell culture methods

Plant cell cultures are typically grown as cell suspension cultures in liquid medium or as callus cultures on solid medium. The culturing of undifferentiated plant cells and calli requires the proper balance of the plant growth hormones auxin and cytokinin.

[edit] Bacterial/Yeast culture methods

For bacteria and yeast, small quantities of cells are usually grown on a solid support that contains nutrients embedded in it, usually a gel such as agar, while large-scale cultures are grown with the cells suspended in a nutrient broth.

[edit] Viral culture methods

The culture of viruses requires the culture of cells of mammalian, plant, fungal or bacterial origin as hosts for the growth and replication of the virus. Whole wild type viruses, recombinant viruses or viral products may be generated in cell types other than their natural hosts under the right conditions. Depending on the species of the virus, infection and viral replication may result in host cell lysis and formation of a viral plaque.

[edit] Common cell lines

Human cell lines
Primate cell lines
Rat tumor cell lines
Mouse cell lines
Plant cell lines
Other species cell lines

[edit] List of cell lines

Cell line  ↓ Meaning  ↓ Organism  ↓ Origin tissue  ↓ Morphology  ↓ Link  ↓
293-T
Human kidney (embryonic)
Derivative of HEK 293ECACC
3T3 cells "3-day transfer, inoculum 3 x 105 cells" Mouse embryonic fibroblast
Also known as NIH 3T3 ECACC
721
Human melanoma

9L
Rat glioblastoma

A2780
Human Ovary Ovarian Cancer ECACC
A2780ADR
Human Ovary Adriamycin-resistant derivative ECACC
A2780cis
Human Ovary Cisplatin-resistant derivative ECACC
A172
human glioblastoma malignant glioma ECACC
A20
murine B lymphoma B lymphocyte
A253
human head and neck carcinoma submandibular duct
A431
human skin epithelium squamous carcinoma ECACCCell Line Data Base
A-549
human lungcarcinoma epithelium DSMZECACC
ALC
murine bone marrow stroma PubMed
B16
murine Melanoma
ECCAC
B35
rat Neuroblastoma
ATCC
BCP-1 cells
Human PBMC HIV+ lymphoma ATCC
BEAS-2B bronchial epithelium + adenovirus 12-SV40 virus hybrid (Ad12SV40) Human lung epithelial ATCC
bEnd.3 brain endothelial mouse brain / cerebral cortex endothelium ATCC
BHK-21 "Baby Hamster Kidney Fibroblast cells" Hamster kidney fibroblast ECACCOlympus
BR 293
human breast breast cancer
BxPC3 Biopsy xenograph of pancreatic carcinoma line 3 human pancreatic adenocarcinoma epithelial ATCC
C3H-10T1/2
Mouse Embryonic mesenchymal cell line
ECACC
C6/36
Asian tiger mosquito larval tissue
ECACC
Cal-27
human tongue squamous cell carcinoma
CHO Chinese hamster ovary hamster Ovary epithelium ECACCICLC
COR-L23
Human Lung
ECACC
COR-L23/CPR
Human Lung
ECACC
COR-L23/5010
Human Lung
ECACC
COR-L23/R23
Human Lung Epithelial ECACC
COS-7 Cercopithecus aethiops, origin-defective SV-40 ape - Cercopithecus aethiops (Chlorocebus) kidney fibroblast ECACCATCC
CML T1 Chronic Myelod Leukaemia T-lymphocyte 1 human CML acute phase T cell leukaemia Blood
CMT canine mammary tumor dog mammary gland epithelium
CT26
murine Colorectal Carcinoma Colon
D17
canine osteosarcoma
ECACC
DH82
canine histiocytosis monocyte/macrophage ECACC J Vir Meth
DU145
human Androgen insensitive carcinoma Prostate
DuCaP Dura mater Cancer of the Prostate human Metastatic Prostate Cancer epithelial PubMed
EL4
mouse
T cell leukaemia ECACC
EM2
human CML blast crisis Ph+ CML line Cell Line Data Base
EM3
human CML blast crisis Ph+ CML line Cell Line Data Base
EMT6/AR1
mouse Breast Epithelial-like ECACC
EMT6/AR10.0
Mouse Breast Epithelial-like ECACC
FM3
human Metastatic lymph node melanoma
H1299
human lung lung cancer
H69
Human Lung
ECACC
HB54
hybridoma hybridoma secretes L243 mAb (against HLA-DR) Human Immunology
HB55
hybridoma hybridoma secretes MA2.1 mAb (against HLA-A2 and HLA-B17) Journal of Immunology
HCA2
human fibroblast
Journal of General Virology
HEK-293 human embryonic kidney human kidney (embryonic) epithelium ATCC
HeLa Henrietta Lacks human Cervical cancer epithelium DSMZECACC
Hepa1c1c7 clone 7 of clone 1 hepatoma line 1 mouse Hepatoma epithelial ECACC ATCC
HL-60 human leukemia human Myeloblast bloodcells ECACCDSMZ
HMEC human mammary epithelial cell human
epithelium ECACC
HT-29
human colon epithelium adenocarcinoma ECACC Cell Line Data Base
Jurkat
human T-Cell-Leukemia white blood cells ECACC DSMZ
JY cells
human lymphoblastoid EBV immortalised B cell
K562 cells
human lymphoblastoid CML blast crisis ECACC
Ku812
human lymphoblastoid erythroleukemia ECACC LGCstandards
KCL22
human lymphoblastoid CML
KG1
human lymphoblastoid AML
KYO1 Kyoto 1 human lymphoblastoid CML DSMZ
LNCap Lymph node Cancer of the Prostate human prostatic adenocarcinoma epithelial ECACCATCC
Ma-Mel 1, 2, 3....48
human
a range of melanoma cell lines
MC-38
mouse
adenocarcinoma
MCF-7 Michigan Cancer Foundation-7 human mammary gland invasive breast ductal carcinoma ER+, PR+
MCF-10A Michigan Cancer Foundation human mammary gland epithelium ATCC
MDA-MB-231 M.D. Anderson - Metastatic Breast human breast cancer ECACC
MDA-MB-468 M.D. Anderson - Metastatic Breast human breast cancer ECACC
MDA-MB-435 M.D. Anderson - Metastatic Breast human breast melanoma or carcinoma (disputed) Cambridge Pathology ECACC
MDCK II Madin Darby canine kidney dog kidney epithelium ECACC ATCC
MDCK II Madin Darby canine kidney dog kidney epithelium [2] ATCC
MOR/0.2R
Human Lung
ECACC
MONO-MAC 6
human WBC myeloid metaplasic AML Cell Line Data Base
MTD-1A
mouse
epithelium
MyEnd myocardial endothelial mouse
endothelium
NCI-H69/CPR
Human Lung
ECACC
NCI-H69/LX10
Human Lung
ECACC
NCI-H69/LX20
Human Lung
ECACC
NCI-H69/LX4
Human Lung
ECACC
NIH-3T3 NIH, 3-day transfer, inoculum 3 x 105 cells mouse embryo fibroblast ECACCATCC
NALM-1

peripheral blood blast-crisis CML Cancer Genetics and Cytogenetics
NW-145


melanoma ESTDAB
OPCN / OPCT cell lines Onyvax[3] Prostate Cancer....

Range of prostate tumour lines Asterand
Peer
human T cell leukemia
DSMZ
PNT-1A / PNT 2


Prostate tumour lines ECACC
RenCa Renal Carcinoma mouse
renal carcinoma
RIN-5F
mouse pancreas

RMA/RMAS
mouse
T cell tumour
Saos-2 cells
human
Osteosarcoma ECACC
Sf-9 Spodoptera frugiperda insect - Spodoptera frugiperda (moth) Ovary
DSMZECACC
SkBr3
human
breast carcinoma
T2
human
T cell leukemia/B cell line hybridoma DSMZ
T-47D
human mammary gland ductal carcinoma
T84
human colorectal Carcinoma / lungmetastasis epithelium ECACCATCC
THP1 cell line
human monocyte AML ECACC
U373
human glioblastoma-astrocytoma epithelium
U87
human glioblastoma-astrocytoma epithelial-like Abcam
U937
human leukaemic monocytic lymphoma
ECACC
VCaP Vertebra Prostate Cancer human metastatic prostate cancer epithelial ECACC ATCC
Vero cells 'Vera Reno' ('green kidney') / 'Vero' ('truth') African Green Monkey kidney epithelium
ECACC
WM39
human skin primary melanoma
WT-49
human lymphoblastoid

X63
mouse melanoma

YAC-1
mouse lymphoma
Cell Line Data Base ECACC
YAR
human B-cell EBV transofrmed [4] Human Immunology
Note: this list is a sample of available cell lines, and is not comprehensive

[edit] See also

[edit] References and notes

  1. ^ ""Cell Culture"". http://www.bioteach.ubc.ca/Bioengineering/CellCulture/index.htm. Retrieved 2006-04-19. 
  2. ^ ""Some landmarks in the development of tissue and cell culture."". http://www.ncbi.nlm.nih.gov/books/bv.fcgi?db=Books&rid=mboc4.table.1516. Retrieved 2006-04-19. 
  3. ^ ""Animals and alternatives in testing."". http://caat.jhsph.edu/pubs/animal_alts/appendix_c.htm. Retrieved 2006-04-19. 
  4. ^ Schiff, Judith Ann. ""An unsung hero of medical research."". http://www.yalealumnimagazine.com/issues/02_02/old_yale.html. Retrieved 2006-04-19.  Yale Alumni Magazine, February 2002.
  5. ^ "LipiMAX purified lipoprotein solution from bovine serum". Selborne Biological Services. 2006. http://www.selbornebiological.com/products/lipimax.htm. Retrieved 2010-02-02. 
  6. ^ Drexler, HG; Dirks; Macleod (Oct 1999). "False human hematopoietic cell lines: cross-contaminations and misinterpretations". Leukemia 13 (10): 1601–7. doi:10.1038/sj/leu/2401510. ISSN 0887-6924. PMID 10516762. 
  7. ^ Drexler, HG; Macleod; Dirks (Dec 2001). "Cross-contamination: HS-Sultan is not a myeloma but a Burkitt lymphoma cell line" (Free full text). Blood 98 (12): 3495–6. doi:10.1182/blood.V98.12.3495. ISSN 0006-4971. PMID 11732505. http://www.bloodjournal.org/cgi/pmidlookup?view=long&pmid=11732505. 
  8. ^ Cabrera, CM; Cobo, F; Nieto, A; Cortés, JL; Montes, RM; Catalina, P; Concha, A (Jun 2006). "Identity tests: determination of cell line cross-contamination". Cytotechnology 51 (2): 45–50. doi:10.1007/s10616-006-9013-8. ISSN 0920-9069. PMID 19002894. 
  9. ^ a b Chatterjee, R (Feb 2007). "Cell biology. Cases of mistaken identity.". Science (New York, N.Y.) 315 (5814): 928–31. doi:10.1126/science.315.5814.928. ISSN 0036-8075. PMID 17303729. 
  10. ^ Liscovitch, M; Ravid (Jan 2007). "A case study in misidentification of cancer cell lines: MCF-7/AdrR cells (re-designated NCI/ADR-RES) are derived from OVCAR-8 human ovarian carcinoma cells.". Cancer letters 245 (1-2): 350–2. doi:10.1016/j.canlet.2006.01.013. ISSN 0304-3835. PMID 16504380. 
  11. ^ Macleod, RA; Dirks; Matsuo; Kaufmann; Milch; Drexler (Nov 1999). "Widespread intraspecies cross-contamination of human tumor cell lines arising at source.". International journal of cancer. Journal international du cancer 83 (4): 555–63. ISSN 0020-7136. PMID 10508494. 
  12. ^ Masters, JR (Apr 2002). "HeLa cells 50 years on: the good, the bad and the ugly.". Nature reviews. Cancer 2 (4): 315–9. doi:10.1038/nrc775. ISSN 1474-175X. PMID 12001993. 
  13. ^ a b Dunham, J.H. and Guthmiller, P. (2008) Doing good science: Authenticating cell line identity. Cell Notes 22, 15–17.
  14. ^ Ceb.com
  15. ^ Reuters (2006-01-26). Wired.com "Quickie Bird Flu Vaccine Created". Wired. http://wired.com/news/wireservice/0,70102-0.html?tw=wn_index_7 Wired.com. Retrieved 2010-01-31. 
  16. ^ Gao W, Soloff AC, Lu X, Montecalvo A, Nguyen DC, Matsuoka Y, Robbins PD, Swayne DE, Donis RO, Katz JM, Barratt-Boyes SM, Gambotto A. (February 2006). "Protection of mice and poultry from lethal H5N1 avian influenza virus through adenovirus-based immunization". Journal of Virology (United States: American Society for Microbiology) 80 (4): 1959–1964. doi:10.1128/JVI.80.4.1959-1964.2006. ISSN 0022-538X. http://jvi.asm.org/cgi/content/abstract/80/4/1959. Retrieved 2010-01-31. 
  17. ^ "NIAID Taps Chiron to Develop Vaccine Against H9N2 Avian Influenza". National Institute of Allergy and Infectious Diseases (NIAID). 2004-08-17. http://www3.niaid.nih.gov/news/newsreleases/2004/h9n2.htm. Retrieved 2010-01-31. 

[edit] External links

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Tuesday, February 9, 2010

Plant Tissue Culture

Plant Tissue Culture

Presenter: Lydiane (Ann) Kyte
Host: Kathy Liu
Discussion

Did you ever have a plant that was so unique or so beautiful that you wished you had hundreds or thousands of them to enjoy or to sell? Plant tissue culture (micropropagation) is a technique which will do just that for us. We are going to discuss this tool which is used so extensively in the nursery business and in plant biotechnology. It is a fascinating and useful tool which allows the rapid production of many genetically identical plants using relatively small amounts of space, supplies and time.

Basically the technique consists of taking a piece of a plant (such as a stem tip, node, meristem, embryo, or even a seed) and placing it in a sterile, (usually gel-based) nutrient medium where it multiplies. The formulation of the growth medium is changed depending upon whether you are trying to get the plant to produce undifferentiated callus tissue, multiply the number of plantlets, grow roots, or multiply embryos for "artificial seed".

For many who become superficially aware of the technique it seems shrouded in mystery and is shrugged off as too technical to be of concern. Actually, it is no more of a mystery than taking a cutting of your favorite house plant and growing it to share with a friend. As for being technical, you can begin plant tissue culture with as little as a cookbook approach and a feeling for sterile technique.

Some people have visions of scientists doing plant tissue cultures in white gowns and masks in hospital-clean environments. Such conditions are excessive. While it is true that mold spores, bacteria, and other contaminants will grow and overrun a culture, air that is not moving has a minimum of contaminants. In addition, disinfection of implements, work surface and nearby areas helps eliminate contaminants.

The guidelines for preparation and the laboratory protocol provided here are given as a place to begin. Included with is a limited discussion of some of the many options you have as you explore micropropagation. We can discuss these in more depth if you have questions, concerns or related experiences to share. I would be particularly interested in success and challenges you may have had or are currently having in your classroom.

Some suggestions are given for the following
(a) Selecting plant sources. Some species, or even clones are easier to grow in culture than others. Some respond reluctantly to culture, some do not respond at all, and many plants have never been tried.

(b) Choosing a growth medium (price, convenience, type of plant and purpose of the micropropagation all enter into this decision.) How important are the kinds of hormones used? On limited scale, media ingredients are available at the grocery and health food stores.

(c) Suggestions for media preparation and sterilization. There are alternatives to sterilization in a pressure cooker or an autoclave.

(d) Methods for cleaning, storing and manipulating explants (plant pieces to be cultured).

Given certain basics there are many options for procedure, equipment and supplies for plant tissue culture. Some of your decisions will be based upon the amount of time, money and space you have. Other decisions will be based upon why you are doing plant tissue culture and what you expect as a result (more plants?) . Catalogs, such as Sigma, Carolina Biological, or Edmund Scientific are good reference and they are for purchasing needed materials..

I look forward to sharing tissue culture experiences with you.


References:
Debergh, P.C. and R.H. Zimmerman, eds. 1991. Micropropagation, Technology and Application. Kluwer Academic Publishers. $61.50. Lab design, info on labs worldwide, in depth discussions of problems. Not for the beginner.

Donnelly, D.J., and W.E.Vidaver, 1988. Glossary of Plant Tissue Culture, Portland, OR. Timber Press, $22.95. Good definitions of tissue culture terms.

Kyte, Lydiane and J. Kleyn, 1996. Plants from Test Tubes: An Introduction to Micropropagation, 3rd ed., Timber Press, 1996 $29.95. Good basics for the beginning amateur or grower.

Smith, Roberta H., 1992. Plant Tissue Culture-Techniques and Experiments. Academic Press. $35.00. Good introduction and broad base for college course.

Trigiano, Robert N, and Dennis J. Gray, eds.1996,Plant Tissue Culture Concepts and Laboratory Exercises. CRC Press. $65.00. For the advanced student.


Sources of supplies:

Carolina Biological

Edmond Scientific

PhytoTechnology Laboratories
This company specializes in plant tissue culture supplies. Downloadable documents (choose MS Word or PDF format) on Media Preparation, Setting Up a Tissue Culture Lab, Basic Laboratory Procedures, and more are available in the "Technical" section of the web site.

Sigma, 1996. "Plant Tissue Culture Catalog".
In addition to media ingredients, premixes, equipment and supplies, this catalog contains a media comparison chart, procedures for media preparations.references and other valuable data.


REPEREN :http://www.accessexcellence.org/LC/ST/st2bgplant.php

Plant Tissue Culture Media

Plant Tissue Culture Media

Plant Tissue Culture refers to the technique of growing plant cells, tissues, organs, seeds or other plant parts in a sterile environment on a nutrient medium. Culture media used for in vitro cultivation of plant cells are composed of following basic components:
Complex Mixture of Salts
These include essential elements or mineral ions important for plant nutrition and their physiological function. The essential elements can further be divided into the following categories:

Macroelements (or macronutrients)
Microelements (or micronutrients)
Iron source
 
Macroelements :- These elements are required in large amounts for plant growth and development. Nitrogen, phosphorus, potassium, magnesium, calcium and sulphur (and carbon, which is added separately) are regarded as macroelements. These elements comprise at least 0.1% of the dry weight of plants.
     
Microelements :- These elements are required in trace amounts for plant growth and development. Manganese, iodine, copper, cobalt, boron, molybdenum, iron and zinc are regarded as microelements, although other elements like aluminium and nickel are frequently found in some formulations.
Plant Tissue Culture Media
     
Iron Source :- Iron is usually added in the medium as iron sulphate, although iron citrate can also be used. Ethylenediaminetetraacetic acid (EDTA) is usually used in conjunction with the iron sulphate. The EDTA complexes with the iron so as to allow the slow and continuous release of iron into the medium. Uncomplexed iron can precipitate out of the medium as ferric oxide.


Organic Supplements
These include vitamins and amino acids. Two vitamins, i.e., thiamine (vitamin B1) and myoinositol (a vitamin B) are essential for the culture of plant cells in vitro. However, other vitamins are often added to for historical reasons. The most commonly used amino acid is glycine. However, arginine, asparagine, aspartic acid, alanine, glutamic acid, glutamine and proline are also used. Amino acids provide a source of reduced nitrogen and, like ammonium ions, uptake causes acidification of the medium. Casein hydrolysate can be used as a source of a mixture of amino acids.


Carbon Source
The most commonly used carbon source is sucrose. It is readily assimilated and relatively stable. Other carbohydrates like glucose, maltose, galactose and sorbitol can also be used and may prove better than sucrose in specialized circumstances.

Gelling Agents
Plant tissue culture media can be used in either liquid or ‘solid’ forms, depending on the type of culture being grown. Agar, produced from seaweed, is the most common type of gelling agent, and is ideal for routine applications. For more demanding applications, a range of purer gelling agents are available. Purified agar or agarose can be used, as can a variety of gellan gums.


Plant Growth Regulators
Specific media manipulations can be used to direct the development of plant cells in culture due to plasticity and totipotency. Plant growth regulators are the critical media components in determining the developmental pathway of the plant cells. There are five main classes of plant growth regulator used in plant cell culture, namely:
Auxins
Cytokinins
Gibberellins
Abscisic Acid
Ethylene
     
Auxins
:-
Auxins promote both cell division and cell growth. IAA (indole-3-acetic acid) is the most important naturally occurring auxin but its use in plant tissue culture media is limited because it is unstable to both heat and light. 2,4-Dichlorophenoxyacetic acid (2,4-D) is the most commonly used auxin and is extremely effective in most circumstances.

 
Cytokinins
:-
Cytokinins promote cell division. Of the naturally occurring cytokinins, only zeatin and 2iP (2-isopentyl adenine have some use in plant tissue culture media. The synthetic analogues, kinetin and BAP (benzylaminopurine), are used more frequently. Non-purine-based chemicals, such as substituted phenylureas, are also used as cytokinins in plant tissue culture media.

 
Auxins
:-
Auxins promote both cell division and cell growth. IAA (indole-3-acetic acid) is the most important naturally occurring auxin but its use in plant tissue culture media is limited because it is unstable to both heat and light. 2,4-Dichlorophenoxyacetic acid (2,4-D) is the most commonly used auxin and is extremely effective in most circumstances.
Plant Tissue Culture Media
     
Cytokinins
:-
Cytokinins promote cell division. Of the naturally occurring cytokinins, only zeatin and 2iP (2-isopentyl adenine have some use in plant tissue culture media. The synthetic analogues, kinetin and BAP (benzylaminopurine), are used more frequently. Non-purine-based chemicals, such as substituted phenylureas, are also used as cytokinins in plant tissue culture media.



Gibberellins
:-
Gibberellins are involved in regulating cell elongation, in determining plant height and fruit-set. Only a few of the gibberellins like GA3 are used in plant tissue culture media.
Abscisic Acid
:-
It is used in plant tissue culture to promote distinct developmental pathways such as somatic embryogenesis. Abscisic acid (ABA) inhibits cell division.



Ethylene
:-
Ethylene is associated with controlling fruit ripening in climacteric fruits, and its use in plant tissue culture is not widespread. Some plant cell cultures produce ethylene, which, if it builds up sufficiently, can inhibit the growth and development of the culture.
 

Antibiotics
Antibiotics are substances produced by certain microorganisms that suppress the growth of other microorganisms and eventually destroy them. Their applications include:
A.
Suppresses bacterial infections in plant cell and tissue culture.
B.
Suppresses mould and yeast infections in cell cultures.
C.
Eliminates Agrobacterium species after the transformation of plant tissue.
These antibiotics can be divided into different classes on the basis of chemical structure and their mechanism of action:

Inhibitors of Bacterial Cell Wall Synthesis
 
e.g. β-lactam antibiotics, Penicillins and Cephalosporins.

Antibiotics that affect Cell Membrane permeability.
 
  •  Antibacterial e.g. Colistin Sulphate, Polymixin B Sulphate, Gramicidin
  •  Antifungal e.g. Amphotericin B, Nystatin, Pimaricin

Bacteriostatic Inhibitors of Protein
Plant Tissue Culture Media
 
Antibiotics that affect the function of 30 S or 50 S ribosomal subunits to cause a reversible inhibition of protein synthesis. e.g. Chloramphenicol, Chlortetracycline HCl, Clindamycin HCl, Doxycycline HCl, Erythromycin, Lincomycin HCl, Oxytetracycline HCl, Spectinomycin sulphate, Tetracycline HCl, Tylosin tartrate, Lincomycin HCl
Bactericide Inhibitors of Protein Synthesis
 
Antibiotics that bind to the 30 S ribosomal subunit and alter protein synthesis which eventually leads to cell death. This group includes:
 
  • Aminoglycosides: Apramycin, Butirosine, Gentamicin, Kanamycin, Neomycin, Streptomycin,
       Tobramycin.
  • Inhibitors of Nucleic Acid Metabolism: e.g. Rifampicin, Mitomycin C and Nalidixic acid
  • Antimetabolites: Antibiotics, which block specific metabolic steps that are essential to microorganisms
       e.g.  Metronidazole, Miconazole, Nitrofurantoin, Trimethoprim and Sulphomethoxazole.
  • Nucleic Acid Analogs, which inhibit enzymes essential for DNA synthesis. e.g. 5-Fluorouracil,    Mercaptopurine.

Preparation of Plant Tissue Culture Medium
Measure approximately 90% of the required volume of the deionized-distilled water in a flask/container of double the size of the required volume.

Add the dehydrated medium into the water and stir to dissolve the medium completely. Gentle heating of the solution may be required to bring powder into solution.

Add desired heat stable supplements to the medium solution.

Add additional deionized-distilled water to the medium solution to obtain the final required volume.

Set the desired pH with NaOH or HCl.

Dispense the medium into culture vessels.

Sterilize the medium by autoclaving at 15 psi (121οC) for appropriate time period. Higher temperature
 
may result in poor cell growth.

Add heat labile supplements after autoclaving.
  referens by: http://www.planttissueculturemedia.com/

Cell culture

Cell culture

Cell culture is the process by which cells are grown under controlled conditions. In practice the term "cell culture" has come to refer to the culturing of cells derived from multicellular eukaryotes, especially animal cells. The historical development and methods of cell culture are closely interrelated to those of tissue culture and organ culture.
Animal cell culture became a common laboratory technique in the mid-1900s,[1] but the concept of maintaining live cell lines separated from their original tissue source was discovered in the 19th century.[2]

History

The 19th-century English physiologist Sydney Ringer developed salt solutions containing the chlorides of sodium, potassium, calcium and magnesium suitable for maintaining the beating of an isolated animal heart outside of the body.[1] In 1885 Wilhelm Roux removed a portion of the medullary plate of an embryonic chicken and maintained it in a warm saline solution for several days, establishing the principle of tissue culture.[3] Ross Granville Harrison, working at Johns Hopkins Medical School and then at Yale University, published results of his experiments from 1907–1910, establishing the methodology of tissue culture.[4]
Cell culture techniques were advanced significantly in the 1940s and 1950s to support research in virology. Growing viruses in cell cultures allowed preparation of purified viruses for the manufacture of vaccines. The Salk polio vaccine was one of the first products mass-produced using cell culture techniques. This vaccine was made possible by the cell culture research of John Franklin Enders, Thomas Huckle Weller, and Frederick Chapman Robbins, who were awarded a Nobel Prize for their discovery of a method of growing the virus in monkey kidney cell cultures.

[edit] Concepts in mammalian cell culture

[edit] Isolation of cells

Cells can be isolated from tissues for ex vivo culture in several ways. Cells can be easily purified from blood, however only the white cells are capable of growth in culture. Mononuclear cells can be released from soft tissues by enzymatic digestion with enzymes such as collagenase, trypsin, or pronase, which break down the extracellular matrix. Alternatively, pieces of tissue can be placed in growth media, and the cells that grow out are available for culture. This method is known as explant culture.
Cells that are cultured directly from a subject are known as primary cells. With the exception of some derived from tumors, most primary cell cultures have limited lifespan. After a certain number of population doublings cells undergo the process of senescence and stop dividing, while generally retaining viability.
An established or immortalised cell line has acquired the ability to proliferate indefinitely either through random mutation or deliberate modification, such as artificial expression of the telomerase gene. There are numerous well established cell lines representative of particular cell types.

[edit] Maintaining cells in culture

Cells are grown and maintained at an appropriate temperature and gas mixture (typically, 37°C, 5% CO2 for mammalian cells) in a cell incubator. Culture conditions vary widely for each cell type, and variation of conditions for a particular cell type can result in different phenotypes being expressed.
Aside from temperature and gas mixture, the most commonly varied factor in culture systems is the growth medium. Recipes for growth media can vary in pH, glucose concentration, growth factors, and the presence of other nutrients. The growth factors used to supplement media are often derived from animal blood, such as calf serum. One complication of these blood-derived ingredients is the potential for contamination of the culture with viruses or prions, particularly in biotechnology medical applications. Current practice is to minimize or eliminate the use of these ingredients wherever possible, but this cannot always be accomplished. Alternative strategies involve sourcing the animal blood from countries with minimum BSE/TSE risk such as Australia and New Zealand, and using purified nutrient concentrates derived from serum in place of whole animal serum for cell culture.[5]
Cells can be grown in suspension or adherent cultures. Some cells naturally live in suspension, without being attached to a surface, such as cells that exist in the bloodstream. There are also cell lines that have been modified to be able to survive in suspension cultures so that they can be grown to a higher density than adherent conditions would allow. Adherent cells require a surface, such as tissue culture plastic or microcarrier, which may be coated with extracellular matrix components to increase adhesion properties and provide other signals needed for growth and differentiation. Most cells derived from solid tissues are adherent. Another type of adherent culture is organotypic culture which involves growing cells in a three-dimensional environment as opposed to two-dimensional culture dishes. This 3D culture system is biochemically and physiologically more similar to in vivo tissue, but is technically challenging to maintain because of many factors (e.g. diffusion).

[edit] Cell line cross-contamination

Cell line cross-contamination can be a problem for scientists working with cultured cells. Studies suggest that anywhere from 15–20% of the time, cells used in experiments have been misidentified or contaminated with another cell line.[6][7][8] Problems with cell line cross contamination have even been detected in lines from the NCI-60 panel, which are used routinely for drug-screening studies.[9][10] Major cell line repositories including the American Type Culture Collection (ATCC) and the German Collection of Microorganisms and Cell Cultures (DSMZ) have received cell line submissions from researchers that were misidentified by the researcher.[9][11] Such contamination poses a problem for the quality of research produced using cell culture lines, and the major repositories are now authenticating all cell line submissions.[12] ATCC uses short tandem repeat (STR) DNA fingerprinting to authenticate its cell lines.[13]
To address this problem of cell line cross-contamination, researchers are encouraged to authenticate their cell lines at an early passage to establish the identity of the cell line. Authentication should be repeated before freezing cell line stocks, every two months during active culturing and before any publication of research data generated using the cell lines. There are many methods for identifying cell lines including isoenzyme analysis, human lymphocyte antigen (HLA) typing and STR analysis.[13]
One significant cell-line cross contaminant is the immortal HeLa cell line.

[edit] Manipulation of cultured cells

As cells generally continue to divide in culture, they generally grow to fill the available area or volume. This can generate several issues:
Among the common manipulations carried out on culture cells are media changes, passaging cells, and transfecting cells. These are generally performed using tissue culture methods that rely on sterile technique. Sterile technique aims to avoid contamination with bacteria, yeast, or other cell lines. Manipulations are typically carried out in a biosafety hood or laminar flow cabinet to exclude contaminating micro-organisms. Antibiotics (e.g. penicillin and streptomycin) and antifungals (e.g. Amphotericin B) can also be added to the growth media.
As cells undergo metabolic processes, acid is produced and the pH decreases. Often, a pH indicator is added to the medium in order to measure nutrient depletion.

[edit] Media changes

In the case of adherent cultures, the media can be removed directly by aspiration and replaced.

[edit] Passaging cells

Passaging (also known as subculture or splitting cells) involves transferring a small number of cells into a new vessel. Cells can be cultured for a longer time if they are split regularly, as it avoids the senescence associated with prolonged high cell density. Suspension cultures are easily passaged with a small amount of culture containing a few cells diluted in a larger volume of fresh media. For adherent cultures, cells first need to be detached; this is commonly done with a mixture of trypsin-EDTA, however other enzyme mixes are now available for this purpose. A small number of detached cells can then be used to seed a new culture.

[edit] Transfection and transduction

Another common method for manipulating cells involves the introduction of foreign DNA by transfection. This is often performed to cause cells to express a protein of interest. More recently, the transfection of RNAi constructs have been realized as a convenient mechanism for suppressing the expression of a particular gene/protein.
DNA can also be inserted into cells using viruses, in methods referred to as transduction, infection or transformation. Viruses, as parasitic agents, are well suited to introducing DNA into cells, as this is a part of their normal course of reproduction.

[edit] Established human cell lines

One of the earliest human cell lines, descended from Henrietta Lacks, who died of the cancer that those cells originated from, the cultured HeLa cells shown here have been stained with Hoechst turning their nuclei blue.
Cell lines that originate with humans have been somewhat controversial in bioethics, as they may outlive their parent organism and later be used in the discovery of lucrative medical treatments. In the pioneering decision in this area, the Supreme Court of California held in Moore v. Regents of the University of California that human patients have no property rights in cell lines derived from organs removed with their consent.[14]

[edit] Generation of hybridomas

It is possible to fuse normal cells with an immortalised cell line. This method is used to produce monoclonal antibodies. In brief, lymphocytes isolated from the spleen (or possibly blood) of an immunised animal are combined with an immortal myeloma cell line (B cell lineage) to produce a hybridoma which has the antibody specificity of the primary lymphoctye and the immortality of the myeloma. Selective growth medium (HA or HAT) is used to select against unfused myeloma cells; primary lymphoctyes die quickly in culture and only the fused cells survive. These are screened for production of the required antibody, generally in pools to start with and then after single cloning.

[edit] Applications of cell culture

Mass culture of animal cell lines is fundamental to the manufacture of viral vaccines and many products of biotechnology. Biological products produced by recombinant DNA (rDNA) technology in animal cell cultures include enzymes, synthetic hormones, immunobiologicals (monoclonal antibodies, interleukins, lymphokines), and anticancer agents. Although many simpler proteins can be produced using rDNA in bacterial cultures, more complex proteins that are glycosylated (carbohydrate-modified) currently must be made in animal cells. An important example of such a complex protein is the hormone erythropoietin. The cost of growing mammalian cell cultures is high, so research is underway to produce such complex proteins in insect cells or in higher plants, use of single embryonic cell and somatic embryos as a source for direct gene transfer via practicle bombardment, transit gene expression and confocal microscopy observation is one of its applications. It also offers to confirm single cell origin of somatic embryos and the asymmetry of the first cell division, which starts the process.

[edit] Tissue culture and engineering

Cell culture is a fundamental component of tissue culture and tissue engineering, as it establishes the basics of growing and maintaining cells ex vivo. The major application of human cell culture is in stem cell industry where mesenchymal stem cells can be cultured and cryopreserved for future use.

[edit] Vaccines

Vaccines for polio, measles, mumps, rubella, and chickenpox are currently made in cell cultures. Due to the H5N1 pandemic threat, research into using cell culture for influenza vaccines is being funded by the United States government. Novel ideas in the field include recombinant DNA-based vaccines, such as one made using human adenovirus (a common cold virus) as a vector,[15][16] or the use of adjuvants.[17]

[edit] Culture of non-mammalian cells

[edit] Plant cell culture methods

Plant cell cultures are typically grown as cell suspension cultures in liquid medium or as callus cultures on solid medium. The culturing of undifferentiated plant cells and calli requires the proper balance of the plant growth hormones auxin and cytokinin.

[edit] Bacterial/Yeast culture methods

For bacteria and yeast, small quantities of cells are usually grown on a solid support that contains nutrients embedded in it, usually a gel such as agar, while large-scale cultures are grown with the cells suspended in a nutrient broth.

[edit] Viral culture methods

The culture of viruses requires the culture of cells of mammalian, plant, fungal or bacterial origin as hosts for the growth and replication of the virus. Whole wild type viruses, recombinant viruses or viral products may be generated in cell types other than their natural hosts under the right conditions. Depending on the species of the virus, infection and viral replication may result in host cell lysis and formation of a viral plaque.

[edit] Common cell lines

Human cell lines
Primate cell lines
Rat tumor cell lines
Mouse cell lines
Plant cell lines
Other species cell lines

[edit] List of cell lines

Cell line  ↓ Meaning  ↓ Organism  ↓ Origin tissue  ↓ Morphology  ↓ Link  ↓
293-T
Human kidney (embryonic)
Derivative of HEK 293ECACC
3T3 cells "3-day transfer, inoculum 3 x 105 cells" Mouse embryonic fibroblast
Also known as NIH 3T3 ECACC
721
Human melanoma

9L
Rat glioblastoma

A2780
Human Ovary Ovarian Cancer ECACC
A2780ADR
Human Ovary Adriamycin-resistant derivative ECACC
A2780cis
Human Ovary Cisplatin-resistant derivative ECACC
A172
human glioblastoma malignant glioma ECACC
A20
murine B lymphoma B lymphocyte
A253
human head and neck carcinoma submandibular duct
A431
human skin epithelium squamous carcinoma ECACCCell Line Data Base
A-549
human lungcarcinoma epithelium DSMZECACC
ALC
murine bone marrow stroma PubMed
B16
murine Melanoma
ECCAC
B35
rat Neuroblastoma
ATCC
BCP-1 cells
Human PBMC HIV+ lymphoma ATCC
BEAS-2B bronchial epithelium + adenovirus 12-SV40 virus hybrid (Ad12SV40) Human lung epithelial ATCC
bEnd.3 brain endothelial mouse brain / cerebral cortex endothelium ATCC
BHK-21 "Baby Hamster Kidney Fibroblast cells" Hamster kidney fibroblast ECACCOlympus
BR 293
human breast breast cancer
BxPC3 Biopsy xenograph of pancreatic carcinoma line 3 human pancreatic adenocarcinoma epithelial ATCC
C3H-10T1/2
Mouse Embryonic mesenchymal cell line
ECACC
C6/36
Asian tiger mosquito larval tissue
ECACC
Cal-27
human tongue squamous cell carcinoma
CHO Chinese hamster ovary hamster Ovary epithelium ECACCICLC
COR-L23
Human Lung
ECACC
COR-L23/CPR
Human Lung
ECACC
COR-L23/5010
Human Lung
ECACC
COR-L23/R23
Human Lung Epithelial ECACC
COS-7 Cercopithecus aethiops, origin-defective SV-40 ape - Cercopithecus aethiops (Chlorocebus) kidney fibroblast ECACCATCC
CML T1 Chronic Myelod Leukaemia T-lymphocyte 1 human CML acute phase T cell leukaemia Blood
CMT canine mammary tumor dog mammary gland epithelium
CT26
murine Colorectal Carcinoma Colon
D17
canine osteosarcoma
ECACC
DH82
canine histiocytosis monocyte/macrophage ECACC J Vir Meth
DU145
human Androgen insensitive carcinoma Prostate
DuCaP Dura mater Cancer of the Prostate human Metastatic Prostate Cancer epithelial PubMed
EL4
mouse
T cell leukaemia ECACC
EM2
human CML blast crisis Ph+ CML line Cell Line Data Base
EM3
human CML blast crisis Ph+ CML line Cell Line Data Base
EMT6/AR1
mouse Breast Epithelial-like ECACC
EMT6/AR10.0
Mouse Breast Epithelial-like ECACC
FM3
human Metastatic lymph node melanoma
H1299
human lung lung cancer
H69
Human Lung
ECACC
HB54
hybridoma hybridoma secretes L243 mAb (against HLA-DR) Human Immunology
HB55
hybridoma hybridoma secretes MA2.1 mAb (against HLA-A2 and HLA-B17) Journal of Immunology
HCA2
human fibroblast
Journal of General Virology
HEK-293 human embryonic kidney human kidney (embryonic) epithelium ATCC
HeLa Henrietta Lacks human Cervical cancer epithelium DSMZECACC
Hepa1c1c7 clone 7 of clone 1 hepatoma line 1 mouse Hepatoma epithelial ECACC ATCC
HL-60 human leukemia human Myeloblast bloodcells ECACCDSMZ
HMEC human mammary epithelial cell human
epithelium ECACC
HT-29
human colon epithelium adenocarcinoma ECACC Cell Line Data Base
Jurkat
human T-Cell-Leukemia white blood cells ECACC DSMZ
JY cells
human lymphoblastoid EBV immortalised B cell
K562 cells
human lymphoblastoid CML blast crisis ECACC
Ku812
human lymphoblastoid erythroleukemia ECACC LGCstandards
KCL22
human lymphoblastoid CML
KG1
human lymphoblastoid AML
KYO1 Kyoto 1 human lymphoblastoid CML DSMZ
LNCap Lymph node Cancer of the Prostate human prostatic adenocarcinoma epithelial ECACCATCC
Ma-Mel 1, 2, 3....48
human
a range of melanoma cell lines
MC-38
mouse
adenocarcinoma
MCF-7 Michigan Cancer Foundation-7 human mammary gland invasive breast ductal carcinoma ER+, PR+
MCF-10A Michigan Cancer Foundation human mammary gland epithelium ATCC
MDA-MB-231 M.D. Anderson - Metastatic Breast human breast cancer ECACC
MDA-MB-468 M.D. Anderson - Metastatic Breast human breast cancer ECACC
MDA-MB-435 M.D. Anderson - Metastatic Breast human breast melanoma or carcinoma (disputed) Cambridge Pathology ECACC
MDCK II Madin Darby canine kidney dog kidney epithelium ECACC ATCC
MDCK II Madin Darby canine kidney dog kidney epithelium [2] ATCC
MOR/0.2R
Human Lung
ECACC
MONO-MAC 6
human WBC myeloid metaplasic AML Cell Line Data Base
MTD-1A
mouse
epithelium
MyEnd myocardial endothelial mouse
endothelium
NCI-H69/CPR
Human Lung
ECACC
NCI-H69/LX10
Human Lung
ECACC
NCI-H69/LX20
Human Lung
ECACC
NCI-H69/LX4
Human Lung
ECACC
NIH-3T3 NIH, 3-day transfer, inoculum 3 x 105 cells mouse embryo fibroblast ECACCATCC
NALM-1

peripheral blood blast-crisis CML Cancer Genetics and Cytogenetics
NW-145


melanoma ESTDAB
OPCN / OPCT cell lines Onyvax[3] Prostate Cancer....

Range of prostate tumour lines Asterand
Peer
human T cell leukemia
DSMZ
PNT-1A / PNT 2


Prostate tumour lines ECACC
RenCa Renal Carcinoma mouse
renal carcinoma
RIN-5F
mouse pancreas

RMA/RMAS
mouse
T cell tumour
Saos-2 cells
human
Osteosarcoma ECACC
Sf-9 Spodoptera frugiperda insect - Spodoptera frugiperda (moth) Ovary
DSMZECACC
SkBr3
human
breast carcinoma
T2
human
T cell leukemia/B cell line hybridoma DSMZ
T-47D
human mammary gland ductal carcinoma
T84
human colorectal Carcinoma / lungmetastasis epithelium ECACCATCC
THP1 cell line
human monocyte AML ECACC
U373
human glioblastoma-astrocytoma epithelium
U87
human glioblastoma-astrocytoma epithelial-like Abcam
U937
human leukaemic monocytic lymphoma
ECACC
VCaP Vertebra Prostate Cancer human metastatic prostate cancer epithelial ECACC ATCC
Vero cells 'Vera Reno' ('green kidney') / 'Vero' ('truth') African Green Monkey kidney epithelium
ECACC
WM39
human skin primary melanoma
WT-49
human lymphoblastoid

X63
mouse melanoma

YAC-1
mouse lymphoma
Cell Line Data Base ECACC
YAR
human B-cell EBV transofrmed [4] Human Immunology
Note: this list is a sample of available cell lines, and is not comprehensive

[edit] See also

[edit] References and notes

  1. ^ ""Cell Culture"". http://www.bioteach.ubc.ca/Bioengineering/CellCulture/index.htm. Retrieved 2006-04-19. 
  2. ^ ""Some landmarks in the development of tissue and cell culture."". http://www.ncbi.nlm.nih.gov/books/bv.fcgi?db=Books&rid=mboc4.table.1516. Retrieved 2006-04-19. 
  3. ^ ""Animals and alternatives in testing."". http://caat.jhsph.edu/pubs/animal_alts/appendix_c.htm. Retrieved 2006-04-19. 
  4. ^ Schiff, Judith Ann. ""An unsung hero of medical research."". http://www.yalealumnimagazine.com/issues/02_02/old_yale.html. Retrieved 2006-04-19.  Yale Alumni Magazine, February 2002.
  5. ^ "LipiMAX purified lipoprotein solution from bovine serum". Selborne Biological Services. 2006. http://www.selbornebiological.com/products/lipimax.htm. Retrieved 2010-02-02. 
  6. ^ Drexler, HG; Dirks; Macleod (Oct 1999). "False human hematopoietic cell lines: cross-contaminations and misinterpretations". Leukemia 13 (10): 1601–7. doi:10.1038/sj/leu/2401510. ISSN 0887-6924. PMID 10516762. 
  7. ^ Drexler, HG; Macleod; Dirks (Dec 2001). "Cross-contamination: HS-Sultan is not a myeloma but a Burkitt lymphoma cell line" (Free full text). Blood 98 (12): 3495–6. doi:10.1182/blood.V98.12.3495. ISSN 0006-4971. PMID 11732505. http://www.bloodjournal.org/cgi/pmidlookup?view=long&pmid=11732505. 
  8. ^ Cabrera, CM; Cobo, F; Nieto, A; Cortés, JL; Montes, RM; Catalina, P; Concha, A (Jun 2006). "Identity tests: determination of cell line cross-contamination". Cytotechnology 51 (2): 45–50. doi:10.1007/s10616-006-9013-8. ISSN 0920-9069. PMID 19002894. 
  9. ^ a b Chatterjee, R (Feb 2007). "Cell biology. Cases of mistaken identity.". Science (New York, N.Y.) 315 (5814): 928–31. doi:10.1126/science.315.5814.928. ISSN 0036-8075. PMID 17303729. 
  10. ^ Liscovitch, M; Ravid (Jan 2007). "A case study in misidentification of cancer cell lines: MCF-7/AdrR cells (re-designated NCI/ADR-RES) are derived from OVCAR-8 human ovarian carcinoma cells.". Cancer letters 245 (1-2): 350–2. doi:10.1016/j.canlet.2006.01.013. ISSN 0304-3835. PMID 16504380. 
  11. ^ Macleod, RA; Dirks; Matsuo; Kaufmann; Milch; Drexler (Nov 1999). "Widespread intraspecies cross-contamination of human tumor cell lines arising at source.". International journal of cancer. Journal international du cancer 83 (4): 555–63. ISSN 0020-7136. PMID 10508494. 
  12. ^ Masters, JR (Apr 2002). "HeLa cells 50 years on: the good, the bad and the ugly.". Nature reviews. Cancer 2 (4): 315–9. doi:10.1038/nrc775. ISSN 1474-175X. PMID 12001993. 
  13. ^ a b Dunham, J.H. and Guthmiller, P. (2008) Doing good science: Authenticating cell line identity. Cell Notes 22, 15–17.
  14. ^ Ceb.com
  15. ^ Reuters (2006-01-26). Wired.com "Quickie Bird Flu Vaccine Created". Wired. http://wired.com/news/wireservice/0,70102-0.html?tw=wn_index_7 Wired.com. Retrieved 2010-01-31. 
  16. ^ Gao W, Soloff AC, Lu X, Montecalvo A, Nguyen DC, Matsuoka Y, Robbins PD, Swayne DE, Donis RO, Katz JM, Barratt-Boyes SM, Gambotto A. (February 2006). "Protection of mice and poultry from lethal H5N1 avian influenza virus through adenovirus-based immunization". Journal of Virology (United States: American Society for Microbiology) 80 (4): 1959–1964. doi:10.1128/JVI.80.4.1959-1964.2006. ISSN 0022-538X. http://jvi.asm.org/cgi/content/abstract/80/4/1959. Retrieved 2010-01-31. 
  17. ^ "NIAID Taps Chiron to Develop Vaccine Against H9N2 Avian Influenza". National Institute of Allergy and Infectious Diseases (NIAID). 2004-08-17. http://www3.niaid.nih.gov/news/newsreleases/2004/h9n2.htm. Retrieved 2010-01-31. 

[edit] External links

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